Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945368.1_cds_XP_016487885.1_78574
CDS Infomation

[gene=LOC107807944] [db_xref=GeneID:107807944] [protein=zinc finger CCCH domain-containing protein 49-like] [protein_id=XP_016487885.1] [location=join(15684..15788,17290..17559,18019..18242,19716..20553)] [gbkey=CDS]
Sequence

ATGGCGCATAGATTGTTGAGAGACGCAGAAGCAGATGGATGGGAACGATCTGATTTTCCG
ATTATTTGTGAGTCTTGTCTTGGAGATAGTCCTTACGTACGAATGACAAAAGCAGATTAT
GACAAGGAGTGCAAGATATGCACACGACCCTTCACAGTGTTCAGATGGAGGCCTGGTCGG
GATGCAAGATACAAAAAATCTGAGATCTGTCAGACCTGCAGCAAATTGAAGAATGTTTGT
CAAGTTTGTCTTTTGGATCTTGAGTATGGTTTGCCAGTTCAGGTCCGAGACACTGCTCTC
AGTATCAATTCGAATGATGCAATTCCCAAGAGTGACGTTAATAGGGAATATTTTGCGGAG
GAACATGACCGCAGGGCTAAAGCAGGGATTGACTACGAATCTTCATATGGGAAAGCTCGT
CCAAATGACACTATTTTGAAGCTCCAAAGAACAACTCCATACTACAAGAGGAATCGGGCA
CATGTTTGTAGTTTCTTTATACGTGGTCAATGTACAAGAGGTTTGGAGTGCCCTTATAGG
CATGAAATGCCTGAGACTGGGGAGTTGTCACAGCAAAACATTAAGGACCGTTATTACGGA
GTTAATGATCCCGTGGCTATGAAGCTACTTAATAAGGCAGGTGAAATGCCTTCATTGGAG
CCCCCAGATGATGAGAGCATTAGAACCCTCTATGTGGGTGGTGTTGATGCAAGAATCAGC
GAACAGGATCTAAGGGACCACTTTTATGCACATGGAGAAATCGAGTCCATTAAAATGGTG
GTGCAGCGTGGTTGTGCTTTTGTAACCTACACGACAAGAGAAGGTGCAGAGAAGGCGGCT
GAGGAACTAGCGAACAGGCTAGTGATAAAAGGCTTGAGGCTGAAGCTTCTCTGGGGGAGA
CCACAGGCTCCTAAACCAGAGACCGAGCTGTCTGATGAAGCAAGACAGCAGGCTGCAGTG
TCACACAGTGGATTGTTGCCCAGAGCTGTCATATCACAACAGCAGAATCAGCTTCCTCCA
CCCCCAGGCACACAGGAACAACCCCCACCAATGCCATACTTCAACATTCCGCCAATGCCT
CAGCAAGAAAGAGCATATTATCCGTCAATGGATCCTCAAAGGATGGGTGCCGTAGTTCCA
TCTCAGGAGGGGGCTTCTAGTTCAGCTACGGGGTCAGGTCCTGAAAACAAGAGTGGTTCT
GAGAAACAACCACAAGGACAGCAGCATTATGCGTATCCACCGGCACCCCCACCTCAAGGT
CAATTTTACCCGCCTTACTATCCACCCTATGGCTATATGCCTCCACCACCGCCTCAACAT
TATCAGCAGTATCCCCCGCCTTATCAAGCTGCCAGACCTCCACCACCTCCTGCTGGTGAG
CAAGCAGCTTATCAGCAGAAGCCTCAACCAGCAGTACCGGCAGCACAGCAACCTTAA

Peptide Sequence

PEP ID

XP_016487885.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 49-like [Nicotiana tabacum]
Sequence

MAHRLLRDAEADGWERSDFPIICESCLGDSPYVRMTKADYDKECKICTRPFTVFRWRPGR
DARYKKSEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE
EHDRRAKAGIDYESSYGKARPNDTILKLQRTTPYYKRNRAHVCSFFIRGQCTRGLECPYR
HEMPETGELSQQNIKDRYYGVNDPVAMKLLNKAGEMPSLEPPDDESIRTLYVGGVDARIS
EQDLRDHFYAHGEIESIKMVVQRGCAFVTYTTREGAEKAAEELANRLVIKGLRLKLLWGR
PQAPKPETELSDEARQQAAVSHSGLLPRAVISQQQNQLPPPPGTQEQPPPMPYFNIPPMP
QQERAYYPSMDPQRMGAVVPSQEGASSSATGSGPENKSGSEKQPQGQQHYAYPPAPPPQG
QFYPPYYPPYGYMPPPPPQHYQQYPPPYQAARPPPPPAGEQAAYQQKPQPAVPAAQQP

Transcript Sequence

Gene sequence data has not been registered.